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1. Full Text Molecular and Evolutionary History of Melanism in North American Gray Wolves
by Tovi M. Anderson and Bridgett M. vonHoldt and Sophie I. Candille and Marco Musiani and Claudia Greco and Daniel R. Stahler and Douglas W. Smith and Badri Padhukasahasram and Ettore Randi and Jennifer A. Leonard and Carlos D. Bustamante and Elaine A. Ostrander and Hua Tang and Robert K. Wayne and Gregory S. Barsh and Teknisk-naturvetenskapliga vetenskapsområdet and Evolutionsbiologi and Biologiska sektionen and Uppsala universitet and Institutionen för evolutionsbiologi and Institutionen för ekologi och genetik
Science, ISSN 0036-8075, 3/2009, Volume 323, Issue 5919, pp. 1339 - 1343
Morphological diversity within closely related species is an essential aspect of evolution and adaptation. Mutations in the Melanocortin 1 receptor (Mc1r) gene... 
Haplotypes | Wolves | Boreal forests | Dogs | Alleles | Genetic loci | Evolution | Reports | Melanosis | Chromosomes | Genetic mutation | GENETIC-BASIS | MULTIDISCIPLINARY SCIENCES | SEQUENCE | PATTERNS | HAPLOTYPE STRUCTURE | DIFFERENTIATION | COAT COLOR | GENOME | DOMESTIC DOGS | MICROSATELLITE LOCI | INTROGRESSION | Sequence Deletion | beta-Defensins - genetics | Gene Flow | Hair Color - genetics | Receptor, Melanocortin, Type 1 - genetics | Selection, Genetic | Wolves - genetics | Molecular Sequence Data | Phylogeny | Melanins - metabolism | Linkage Disequilibrium | Biological Evolution | Phenotype | Animals | Coyotes - genetics | Pigmentation - genetics | Agouti Signaling Protein - genetics | Ecosystem | Polymorphism, Single Nucleotide | Dogs - genetics | Mutation | Gene mutations | Causes of | Genetic aspects | Research | Peptide hormones | Melanism (Evolutionary adaptation) | Skin | Evolutionary biology | Population genetics | Color | Biological Sciences | Biology | Biologi | Naturvetenskap | Natural Sciences | Biologiska vetenskaper
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2. Full Text Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication
by Vonholdt, Bridgett M and Pollinger, John P and Lohmueller, Kirk E and Han, Eunjung and Parker, Heidi G and Quignon, Pascale and Degenhardt, Jeremiah D and Boyko, Adam R and Earl, Dent A and Auton, Adam and Reynolds, Andy and Bryc, Kasia and Brisbin, Abra and Knowles, James C and Mosher, Dana S and Spady, Tyrone C and Elkahloun, Abdel and Geffen, Eli and Pilot, Malgorzata and Jedrzejewski, Wlodzimierz and Greco, Claudia and Randi, Ettore and Bannasch, Danika and Wilton, Alan and Shearman, Jeremy and Musiani, Marco and Cargill, Michelle and Jones, Paul G and Qian, Zuwei and Huang, Wei and Ding, Zhao-Li and Zhang, Ya-Ping and Bustamante, Carlos D and Ostrander, Elaine A and Novembre, John and Wayne, Robert K
Nature, ISSN 0028-0836, 04/2010, Volume 464, Issue 7290, pp. 898 - 902
Advances in genome technology have facilitated a new understanding of the historical and genetic processes crucial to rapid phenotypic evolution under... 
ORIGIN | WILD | LINKAGE DISEQUILIBRIUM | GENOTYPE | MULTIDISCIPLINARY SCIENCES | ANCIENT DNA | POPULATION-STRUCTURE | SELECTION | DELETION | Animals, Wild - classification | Middle East - ethnology | Far East - ethnology | Breeding | Wolves - classification | Computational Biology | Genome - genetics | Wolves - genetics | Phylogeny | Animals, Domestic - classification | Haplotypes - genetics | Phenotype | Animals | Animals, Domestic - genetics | Dogs - classification | Polymorphism, Single Nucleotide - genetics | Animals, Wild - genetics | Dogs - genetics | Evolution, Molecular | Dogs | Physiological aspects | Domestication | Genetic aspects | Mitochondrial DNA | Research | Single nucleotide polymorphisms | Animal populations | Genetic diversity | Wolves | Life Sciences | Populations and Evolution | Genetics | Biodiversity
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3. Full Text Genome Sequencing Highlights the Dynamic Early History of Dogs
by Freedman, Adam H and Gronau, Ilan and Schweizer, Rena M and Ortega-Del Vecchyo, Diego and Han, Eunjung and Silva, Pedro M and Galaverni, Marco and Fan, Zhenxin and Marx, Peter and Lorente-Galdos, Belen and Beale, Holly and Ramirez, Oscar and Hormozdiari, Farhad and Alkan, Can and Vilà, Carles and Squire, Kevin and Geffen, Eli and Kusak, Josip and Boyko, Adam R and Parker, Heidi G and Lee, Clarence and Tadigotla, Vasisht and Siepel, Adam and Bustamante, Carlos D and Harkins, Timothy T and Nelson, Stanley F and Ostrander, Elaine A and Marques-Bonet, Tomas and Wayne, Robert K and Novembre, John
PLoS Genetics, ISSN 1553-7390, 01/2014, Volume 10, Issue 1, p. e1004016
To identify genetic changes underlying dog domestication and reconstruct their early evolutionary history, we generated high-quality genome sequences from... 
ORIGIN | WOLVES | WILD | EVOLUTION | GENETICS | CANIDS | DNA | GENES | GENETICS & HEREDITY | INFERENCE | DOMESTIC DOGS | Amylases - genetics | Wolves - classification | Wolves - genetics | DNA Copy Number Variations - genetics | Phylogeny | Genetic Variation | Animals | DNA, Mitochondrial - genetics | Diet | Animals, Domestic - genetics | Population Density | Dogs | Evolution, Molecular | Zoological research | Genetic research | Genetic aspects | Research | Nucleotide sequencing | DNA sequencing | Genètica | Llops | ADN mitocondrial | Gossos | Evolució molecular | Studies | Animal populations | Genomes | Wolves | Genes
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4. Full Text Wolf outside, dog inside? The genomic make-up of the Czechoslovakian Wolfdog
by Caniglia, Romolo and Fabbri, Elena and Hulva, Pavel and Bolfíková, Barbora Černá and Jindřichová, Milena and Stronen, Astrid Vik and Dykyy, Ihor and Camatta, Alessio and Carnier, Paolo and Randi, Ettore and Galaverni, Marco
BMC Genomics, ISSN 1471-2164, 07/2018, Volume 19, Issue 1, pp. 533 - 17
Background: Genomic methods can provide extraordinary tools to explore the genetic background of wild species and domestic breeds, optimize breeding practices,... 
Genome-wide differentiation | Selection | Admixture history | Demographic history | Genome ancestry | Czechoslovakian Wolfdog | Hybridization | IDENTIFICATION | ADMIXTURE | DIVERSIFYING SELECTION | HOMOZYGOSITY | ARTIFICIAL SELECTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | MUTATION | GENETICS & HEREDITY | WIDE SIGNATURES | BREED | DOMESTIC DOGS | HISTORY | Genetics, Population | Circadian Rhythm - genetics | Wolves - genetics | DNA - metabolism | Catechol O-Methyltransferase - genetics | Linkage Disequilibrium | DNA - isolation & purification | Animals | Hybridization, Genetic | Bayes Theorem | Lipid Metabolism - genetics | Czechoslovakia | Polymorphism, Single Nucleotide | Dogs - genetics | Genome | Principal Component Analysis | Gene Ontology | Canidae | Genetic aspects | Research | Genomics | Hybrids | Identification methods | Genes | Population number | Lipids | Animal populations | Genomes | Mitochondrial DNA | Single-nucleotide polymorphism | Homozygosity | Learning | Genetics | Inbreeding | Lipid metabolism | Deoxyribonucleic acid--DNA | Communication | Circadian rhythms | Forensic science | Breeding | Domestication | Admixtures | Gene expression | Metabolism | Hereditary diseases | Studies | Wolves | Outliers (statistics) | Pedigree | Dogs | Mutation | Bayesian analysis
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5. Full Text Hypoxia Adaptations in the Grey Wolf (Canis lupus chanco) from Qinghai-Tibet Plateau
by Zhang, Wenping and Fan, Zhenxin and Han, Eunjung and Hou, Rong and Zhang, Liang and Galaverni, Marco and Huang, Jie and Liu, Hong and Silva, Pedro and Li, Peng and Pollinger, John P and Du, Lianming and Zhang, XiuyYue and Yue, Bisong and Wayne, Robert K and Zhang, Zhihe
PLoS Genetics, ISSN 1553-7390, 2014, Volume 10, Issue 7, p. e1004466
The Tibetan grey wolf (Canis lupus chanco) occupies habitats on the Qinghai-Tibet Plateau, a high altitude (> 3000 m) environment where low oxygen tension... 
HIGH-ALTITUDE ADAPTATION | WHOLE-GENOME SEQUENCES | DATABASE | GENETIC ADAPTATION | GENETICS & HEREDITY | POPULATION-STRUCTURE | SELECTION | IDENTIFICATION | PROTEIN FUNCTION | DISCOVERY | HISTORY | Genetics, Population | Hypoxia - genetics | Animals | Adaptation, Physiological - genetics | Oxygen Consumption - genetics | Humans | Wolves - genetics | Polymorphism, Single Nucleotide | Acclimatization - genetics | Tibet | Altitude | Selection, Genetic - genetics | Wolves | Distribution | Physiological aspects | Genetic research | Genetic aspects | Single nucleotide polymorphisms | Research | Natural selection | Studies | Genomics | Hypoxia | Animal populations | Genomes | Adaptation
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6. Full Text The genomic signature of dog domestication reveals adaptation to a starch-rich diet
by Axelsson, Erik and Ratnakumar, Abhirami and Arendt, Maja-Louise and Maqbool, Khurram and Webster, Matthew T and Perloski, Michele and Liberg, Olof and Arnemo, Jon M and Hedhammar, Åke and Lindblad-Toh, Kerstin and Medicinska fakulteten and Science for Life Laboratory, SciLifeLab and Medicinska och farmaceutiska vetenskapsområdet and Institutionen för medicinsk biokemi och mikrobiologi and Uppsala universitet
Nature, ISSN 0028-0836, 03/2013, Volume 495, Issue 7441, pp. 360 - 364
The domestication of dogs. was an important episode in the development of human civilization. The precise timing and location of this event is debated(1-5) and... 
SPERM | TRANSPORTERS | GLUCOSE | MULTIDISCIPLINARY SCIENCES | SELECTION | MALTASE-GLUCOAMYLASE GENE | HISTORY | alpha-Glucosidases - genetics | Amylases - genetics | Animals | Animals, Domestic - genetics | Starch | Genome - genetics | Wolves - genetics | Glycogen Storage Disease Type II | Dogs - genetics | Mutation | Diet - veterinary | Genetic aspects | Research | Food and nutrition | High-carbohydrate diet | Health aspects | Dogs | Genetics | Standard deviation | Genomes | Glucose | Wolves | Naturvetenskap | Natural Sciences
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7. Full Text Ancient DNA Analysis Affirms the Canid from Altai as a Primitive Dog
by Druzhkova, Anna S and Thalmann, Olaf and Trifonov, Vladimir A and Leonard, Jennifer A and Vorobieva, Nadezhda V and Ovodov, Nikolai D and Graphodatsky, Alexander S and Wayne, Robert K
PLoS ONE, ISSN 1932-6203, 03/2013, Volume 8, Issue 3, p. e57754
The origin of domestic dogs remains controversial, with genetic data indicating a separation between modern dogs and wolves in the Late Pleistocene. However,... 
MAXIMUM-LIKELIHOOD | ORIGIN | WOLVES | SEQUENCES | GENETICS | MULTIDISCIPLINARY SCIENCES | DOMESTICATION | PATTERNS | WOLF | MITOCHONDRIAL-DNA | EVOLUTIONARY HISTORY | Geography | Genome, Mitochondrial - genetics | Wolves - genetics | Extinction, Biological | Phylogeny | DNA - genetics | Likelihood Functions | Animals | DNA, Mitochondrial - genetics | Asia | Base Sequence | Models, Genetic | Dogs - genetics | Genetic aspects | Analysis | DNA | Dogs | Ethnography | Domestication | Genomes | Mitochondrial DNA | Prehistoric | Nucleotides | Fossils | Genetic relationship | Archaeology | Mitochondria | Wolves | Cellular biology | Phylogenetics | Evolution | Genetics | Genetic testing | Molecular biology | Bioinformatics | Deoxyribonucleic acid--DNA | Pleistocene | Deoxyribonucleic acid
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8. Full Text Nuclear Genomic Sequences Reveal that Polar Bears Are an Old and Distinct Bear Lineage
by Frank Hailer and Verena E. Kutschera and Björn M. Hallström and Denise Klassert and Steven R. Fain and Jennifer A. Leonard and Ulfur Arnason and Axel Janke and Neurosurgery and Neurokirurgi and Lund University and Lunds universitet
Science, ISSN 0036-8075, 4/2012, Volume 336, Issue 6079, pp. 344 - 347
Recent studies have shown that the polar bear matriline (mitochondrial DNA) evolved from a brown bear lineage since the late Pleistocene, potentially... 
Genomics | REPORTS | Evolution | Genetic loci | Evolutionary genetics | Brown bears | Mitochondrial DNA | Genomes | Genetic diversity | Polar bears | Speciation | GENETIC-STRUCTURE | PHYLOGENY | ORIGIN | WOLVES | SPECIATION | MULTIDISCIPLINARY SCIENCES | URSIDAE | ANCIENT HYBRIDIZATION | MITOCHONDRIAL-DNA | INFERENCE | HISTORY | Haplotypes | Gene Flow | Molecular Sequence Data | Phylogeny | Multilocus Sequence Typing | Biological Evolution | Genetic Variation | Ursidae - classification | Animals | DNA, Mitochondrial - genetics | Cell Nucleus - genetics | Hybridization, Genetic | Genetic Speciation | Ursidae - genetics | Bayes Theorem | Genome | Animal genetics | Genetic aspects | Research | Nucleotide sequencing | Bears | Natural history | DNA sequencing | Evolutionary biology | Neurologi | Clinical Medicine | Neurology | Medical and Health Sciences | Medicin och hälsovetenskap | Surgery | Klinisk medicin | Kirurgi
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9. Full Text Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs
by Clare D. Marsden and Diego Ortega-Del Vecchyo and Dennis P. O’Brien and Jeremy F. Taylor and Oscar Ramirez and Carles Vilà and Tomas Marques-Bonet and Robert D. Schnabel and Robert K. Wayne and Kirk E. Lohmueller
Proceedings of the National Academy of Sciences of the United States of America, ISSN 0027-8424, 1/2016, Volume 113, Issue 1, pp. 152 - 157
Population bottlenecks, inbreeding, and artificial selection can all, in principle, influence levels of deleterious genetic variation. However, the relative... 
Domestication | Bottleneck | Selective sweep | Deleterious mutations | MULTIDISCIPLINARY SCIENCES | POPULATIONS | deleterious mutations | POLYMORPHISM | GENOME | MUTATION LOAD | COST | PROTEIN EVOLUTION | domestication | bottleneck | selective sweep | ACCUMULATION | REVEALS | HISTORY | Datasets as Topic | Genome - genetics | Selection, Genetic | Wolves - genetics | Dog Diseases - genetics | Genetic Variation | Animals | Animals, Domestic - genetics | Population Density | Heterozygote | Inbreeding | Dogs - genetics | Selective Breeding - genetics | Endangered Species | Genetic aspects | Observations | Genetic variation | Domestic animals | Dogs | Biological Sciences
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10. Full Text Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
by Pickrell, Joseph K and Pritchard, Jonathan K
PLoS Genetics, ISSN 1553-7390, 11/2012, Volume 8, Issue 11, p. e1002967
Many aspects of the historical relationships between populations in a species are reflected in genetic data. Inferring these relationships from genetic data,... 
DOMESTIC DOG | MAXIMUM-LIKELIHOOD-ESTIMATION | EVOLUTIONARY TREES | GENETIC-STRUCTURE | SEQUENCE | GENETICS & HEREDITY | MIGRATION RATES | NUCLEOTIDE POLYMORPHISM DATA | ADMIXTURE | SELECTION | HISTORY | Allelomorphism | Physiological aspects | Research | Population genetics | Health aspects | Genomics | Trees | Studies | Genealogy | Demography | Migration | Genetics | Graphs | Population | Principal components analysis | Genomes | History | Methods | Quantitative Biology - Populations and Evolution
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