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1. Full Text Direct ethanol production from hemicellulosic materials of rice straw by use of an engineered yeast strain codisplaying three types of hemicellulolytic enzymes on the surface of xylose-utilizing Saccharomyces cerevisiae cells
by Sakamoto, Takatoshi and Hasunuma, Tomohisa and Hori, Yoshimi and Yamada, Ryosuke and Kondo, Akihiko
Journal of biotechnology, ISSN 0168-1656, 04/2012, Volume 158, Issue 4, pp. 203 - 210
Bioethanol | Biomass | Lignocellulose | Cell surface display | Life Sciences & Biomedicine | Biotechnology & Applied Microbiology | Science & Technology | Aldehyde Reductase - genetics | Xylans - metabolism | D-Xylulose Reductase - genetics | Oryza - metabolism | Saccharomyces cerevisiae - genetics | Endo-1,4-beta Xylanases - genetics | Polysaccharides - genetics | Glucuronates - metabolism | D-Xylulose Reductase - metabolism | Pichia - enzymology | Xylose - genetics | Saccharomyces cerevisiae - metabolism | Pichia - metabolism | Lignin - metabolism | beta-Glucosidase - genetics | Glucuronates - genetics | Escherichia coli - metabolism | beta-Glucosidase - metabolism | Aldehyde Reductase - metabolism | Endo-1,4-beta Xylanases - metabolism | Metabolic Engineering - methods | Xylose - metabolism | Ethanol - metabolism | Phosphotransferases (Alcohol Group Acceptor) - genetics | Trichoderma - genetics | Oligosaccharides - metabolism | Saccharomyces cerevisiae Proteins - genetics | Fermentation | Phosphotransferases (Alcohol Group Acceptor) - metabolism | Polysaccharides - metabolism | Hydrolysis | Xylans - genetics | Aspergillus oryzae - genetics | Escherichia coli - genetics | Saccharomyces cerevisiae Proteins - metabolism | Saccharomyces cerevisiae - enzymology | Lignin - genetics | Aspergillus oryzae - metabolism | Oligosaccharides - genetics | Trichoderma - metabolism | Xylitol | Enzymes | Alcohol, Denatured | Alcohol | Production processes | Sugars | Production data | Rice | Alcohols | Monosaccharides | Index Medicus
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2. Full Text Identification and characterization of an arabidopsis mutant with altered localization of NIP5;1, a plasma membrane boric acid channel, reveals the requirement for d-galactose in endomembrane organization
by Uehara, Masataka and Wang, Sheliang and Kamiya, Takehiro and Shigenobu, Shuji and Yamaguchi, Katsushi and Fujiwara, Toru and Naito, Satoshi and Takano, Junpei
Plant and cell physiology, ISSN 0032-0781, 2014, Volume 55, Issue 4, pp. 704 - 714
Arabidopsis thaliana | Cell wall, endomembrane, d-galactose, UDP-d-glucose-4-epimerase | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Arabidopsis - enzymology | Xylans - metabolism | Galactose - pharmacology | Cell Aggregation - drug effects | Protein Transport - drug effects | Endosomes - metabolism | Ethylenes - metabolism | Arabidopsis Proteins - metabolism | trans-Golgi Network - metabolism | Cell Wall - drug effects | Endosomes - drug effects | Boric Acids - metabolism | Cell Membrane - metabolism | Glucans - metabolism | Plant Proteins - metabolism | Green Fluorescent Proteins - metabolism | Actin Cytoskeleton - metabolism | Arabidopsis - drug effects | Endocytosis - drug effects | Aquaporins - metabolism | Chromosome Mapping | Genome, Plant | Mutation - genetics | Sequence Analysis, DNA | Arabidopsis - metabolism | Polysaccharides - metabolism | trans-Golgi Network - drug effects | Arabidopsis - genetics | Ion Channels - metabolism | Cell Wall - metabolism | Alleles | Cytoskeleton - metabolism | Intracellular Membranes - drug effects | Mucoproteins - metabolism | Cytoskeleton - drug effects | Intracellular Membranes - metabolism | UDPglucose 4-Epimerase - metabolism | Index Medicus
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3. Full Text An Arabidopsis Cell Wall Proteoglycan Consists of Pectin and Arabinoxylan Covalently Linked to an Arabinogalactan Protein
by Li Tan and Stefan Eberhard and Sivakumar Pattathil and Clayton Warder and John Glushka and Chunhua Yuan and Zhangying Hao and Xiang Zhu and Utku Avci and Jeffrey S. Miller and David Baldwin and Charles Pham and Ronald Orlando and Alan Darvill and Michael G. Hahn and Marcia J. Kieliszewski and Debra Mohnen and Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States). BioEnergy Science Center (BESC)
The Plant cell, ISSN 1040-4651, 1/2013, Volume 25, Issue 1, pp. 270 - 287
Proteins | Music analysis | Polysaccharides | Proteoglycans | Cell walls | RESEARCH ARTICLES | Mass spectroscopy | Plants | Xylans | Sugars | Plant cells | Biochemistry & Molecular Biology | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Fundamental and applied biological sciences. Psychology | Biological and medical sciences | Plant physiology and development | Models, Structural | Mucoproteins - immunology | Xylans - metabolism | Pectins - metabolism | Glycoproteins - metabolism | Molecular Sequence Data | Biomass | Proteoglycans - chemistry | Arabidopsis Proteins - metabolism | Plant Proteins - chemistry | Glycoproteins - isolation & purification | Polysaccharides - chemistry | Plant Proteins - metabolism | Antibodies, Monoclonal - immunology | Mucoproteins - genetics | Glycoproteins - genetics | Amino Acid Sequence | Arabidopsis Proteins - genetics | Arabidopsis - chemistry | Cell Wall - genetics | Proteoglycans - metabolism | Plant Proteins - immunology | Cell Wall - chemistry | Epitopes | Pectins - chemistry | Arabidopsis - metabolism | Polysaccharides - metabolism | Arabidopsis - genetics | Arabidopsis Proteins - isolation & purification | Plant Proteins - genetics | Xylans - chemistry | Arabidopsis Proteins - chemistry | Mucoproteins - chemistry | Cell Wall - metabolism | Protein Isoforms | Proteomics | Mutation | Mucoproteins - metabolism | Arabidopsis thaliana | Physiological aspects | Genetic aspects | Pectin | Properties | Index Medicus
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4. Full Text Growth control and cell wall signaling in plants
by Wolf, Sebastian and Hématy, Kian and Höfte, Herman
Annual review of plant biology, ISSN 1543-5008, 06/2012, Volume 63, Issue 1, pp. 381 - 407
mechanosensing | pathogen resistance | receptor kinases | cell wall integrity signaling | Phosphotransferases - metabolism | Plant Cells - metabolism | Xylans - metabolism | Pectins - metabolism | Water - metabolism | Cell Wall - chemistry | Arabidopsis Proteins - metabolism | Cell Wall - metabolism | Signal Transduction - physiology | Glucans - metabolism | Plant Proteins - metabolism | Calcium-Calmodulin-Dependent Protein Kinases - metabolism | Plant Development - physiology | Physiological aspects | Control | Research | Plant physiology | Growth (Plants) | Plant cell walls | Plant biology | Herbivores | Flowers & plants | Abiotic stress | Cells | Index Medicus | Space life sciences | Life Sciences | Agricultural sciences
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5. Full Text The arabidopsis DUF231 domain-containing protein ESK1 mediates 2-o- and 3-o-acetylation of xylosyl residues in xylan
by Yuan, Youxi and Teng, Quincy and Zhong, Ruiqin and Ye, Zheng-Hua
Plant and cell physiology, ISSN 0032-0781, 07/2013, Volume 54, Issue 7, pp. 1186 - 1199
Xylan | Acetyltransferase | Acetylation | Secondary wall | Arabidopsis | Life Sciences & Biomedicine | Plant Sciences | Science & Technology | Cell Biology | Acetyltransferases - metabolism | Xylans - metabolism | Pentosyltransferases - metabolism | Acetyltransferases - genetics | Arabidopsis Proteins - metabolism | Protoplasts - metabolism | Oligosaccharides - chemistry | Plants, Genetically Modified | Gene Expression Regulation, Plant | Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | Pentosyltransferases - genetics | Endo-1,4-beta Xylanases - metabolism | Arabidopsis Proteins - genetics | Arabidopsis - cytology | Cell Wall - genetics | Binding Sites - genetics | Oligosaccharides - metabolism | Transcription Factors - genetics | Reverse Transcriptase Polymerase Chain Reaction | Arabidopsis - metabolism | Arabidopsis - genetics | Transcription Factors - metabolism | Microscopy, Confocal | Xylans - chemistry | Cell Wall - metabolism | Golgi Apparatus - metabolism | Luminescent Proteins - genetics | Mutation | Luminescent Proteins - metabolism | Index Medicus
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6. Full Text A lytic polysaccharide monooxygenase with broad xyloglucan specificity from the brown-rot fungus Gloeophyllum trabeum and its action on cellulose-xyloglucan complexes
by Kojima, Yuka and Várnai, Anikó and Ishida, Takuya and Sunagawa, Naoki and Petrovic, Dejan M and Igarashi, Kiyohiko and Jellison, Jody and Goodell, Barry and Alfredsen, Gry and Westereng, Bjørge and Eijsink, Vincent G.H and Yoshida, Makoto
Applied and environmental microbiology, ISSN 0099-2240, 2016, Volume 82, Issue 22, pp. 6557 - 6572
Life Sciences & Biomedicine | Microbiology | Biotechnology & Applied Microbiology | Science & Technology | Viscosity | Chromatography, Ion Exchange | Xylans - metabolism | Mixed Function Oxygenases - metabolism | Neurospora crassa - metabolism | Fungal Proteins - genetics | Wood - metabolism | Basidiomycota - metabolism | Polysaccharides - metabolism | Neurospora crassa - enzymology | Cellulase - metabolism | Lignin - metabolism | Basidiomycota - enzymology | Cell Wall - metabolism | Mass Spectrometry | Pichia - genetics | Basidiomycota - genetics | Mixed Function Oxygenases - isolation & purification | Wood - microbiology | Glucans - metabolism | Cellulose - metabolism | Fungal Proteins - metabolism | Oxidases | Physiological aspects | Research | Cell death | Fungi, Phytopathogenic | Fungi | Carbohydrates | Mass spectrometry | Cellulose fibers | Chromatography | Index Medicus
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7. Full Text Metagenomic and functional analysis of hindgut microbiota of a wood-feeding higher termite
by Warnecke, Falk and Luginbühl, Peter and Ivanova, Natalia and Ghassemian, Majid and Richardson, Toby H and Stege, Justin T and Cayouette, Michelle and McHardy, Alice C and Djordjevic, Gordana and Aboushadi, Nahla and Sorek, Rotem and Tringe, Susannah G and Podar, Mircea and Martin, Hector Garcia and Kunin, Victor and Dalevi, Daniel and Madejska, Julita and Kirton, Edward and Platt, Darren and Szeto, Ernest and Salamov, Asaf and Barry, Kerrie and Mikhailova, Natalia and Kyrpides, Nikos C and Matson, Eric G and Ottesen, Elizabeth A and Zhang, Xinning and Hernández, Myriam and Murillo, Catalina and Acosta, Luis G and Rigoutsos, Isidore and Tamayo, Giselle and Green, Brian D and Chang, Cathy and Rubin, Edward M and Mathur, Eric J and Robertson, Dan E and Hugenholtz, Philip and Leadbetter, Jared R
Nature (London), ISSN 0028-0836, 11/2007, Volume 450, Issue 7169, pp. 560 - 565
Science & Technology - Other Topics | Multidisciplinary Sciences | Science & Technology | Fundamental and applied biological sciences. Psychology | Normal microflora of man and animals. Rumen | Animals | Animal, plant and microbial ecology | Protozoa. Invertebrata | Microbial ecology | Biological and medical sciences | Animal and plant ecology | Autoecology | Xylans - metabolism | Genes, Bacterial - genetics | Bioelectric Energy Sources | Genomics | Glycoside Hydrolases - genetics | Molecular Sequence Data | Costa Rica | Lignin - metabolism | Polymerase Chain Reaction | Glycoside Hydrolases - chemistry | Symbiosis | Carbon - metabolism | Isoptera - microbiology | Bacteria - metabolism | Catalytic Domain | Wood - metabolism | Bacteria - genetics | Hydrolysis | Genome, Bacterial - genetics | Bacteria - isolation & purification | Intestines - microbiology | Models, Biological | Wood - chemistry | Bacteria - enzymology | Glycoside Hydrolases - metabolism | Isoptera - metabolism | Cellulose - metabolism | Microbiology | Wood | Catalysts | Termites | Bacteria | Biochemistry | Index Medicus
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8. Full Text Comparison of the effects of five dietary fibers on mucosal transcriptional profiles, and luminal microbiota composition and SCFA concentrations in murine colon
by Lange, Katja and Hugenholtz, Floor and Jonathan, Melliana C and Schols, Henk A and Kleerebezem, Michiel and Smidt, Hauke and Müller, Michael and Hooiveld, Guido J. E. J
Molecular nutrition & food research, ISSN 1613-4125, 2015, Volume 59, Issue 8, pp. 1590 - 1602
Microbiota | Colon | Dietary fiber | Transcriptomics | Gut health | Life Sciences & Biomedicine | Food Science & Technology | Science & Technology | Colon - enzymology | Intestinal Mucosa - metabolism | Xylans - metabolism | Starch - metabolism | Male | Gene Expression Profiling | Clostridium - isolation & purification | PPAR gamma - metabolism | Fatty Acids, Volatile - metabolism | Molecular Typing | Clostridium - classification | Intestinal Mucosa - enzymology | PPAR gamma - genetics | Plant Gums - metabolism | Galactans - metabolism | Mice, Inbred C57BL | Clostridium - growth & development | Gastrointestinal Microbiome | Gene Expression Regulation | Dietary Fiber - metabolism | Intestinal Mucosa - microbiology | Oligosaccharides - metabolism | Fermentation | Colon - metabolism | Animals | Energy Metabolism | Mannans - metabolism | Colon - microbiology | Inulin - metabolism | Microbiota (Symbiotic organisms) | Physiological aspects | Genetic research | Cellular signal transduction | Genetic aspects | Dextrins | Genetic transcription | Comparative analysis | Index Medicus
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