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Journal of Molecular Biology, ISSN 0022-2836, 02/2019, Volume 431, Issue 4, pp. 857 - 863
Topologically knotted proteins are tantalizing examples of how polypeptide chains can explore complex free energy landscapes to efficiently attain defined... 
protein folding | SPOUT RNA methyltransferase | circular permutation | knotted protein | FOLDING MECHANISM | DATABASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | RNA | Hydrogen | Transferases | Homocysteine | Mass spectrometry | Chromatography | Protein binding
Journal Article
Journal Article
Discrete Applied Mathematics, ISSN 0166-218X, 10/2014, Volume 175, pp. 71 - 78
A bipartite graph with partite sets and is a if there are two linear orderings of its vertices such that is an edge for and if and only if appears later than... 
Indifference bigraph | Interval bigraph | Interval containment poset | Chain graph | Permutation graph | MATHEMATICS, APPLIED | SEMIORDERS | ALGORITHM | INDIFFERENCE DIGRAPHS | CIRCULAR-ARC GRAPHS | Intervals | Permutations | Mathematical analysis | Set theory | Graphs | Representations | Order disorder | Containment
Journal Article
Conference Proceeding
Protein Engineering, Design and Selection, ISSN 1741-0126, 03/2018, Volume 31, Issue 3, pp. 65 - 68
Journal Article
PROCEEDINGS OF THE ROMANIAN ACADEMY SERIES A-MATHEMATICS PHYSICS TECHNICAL SCIENCES INFORMATION SCIENCE, ISSN 1454-9069, 07/2019, Volume 20, Issue 3, pp. 307 - 315
We propose a new variant of network of evolutionary picture processors, where the operations mask and unmask considered in [4] are replaced by the circular... 
network of picture processors with circular permutation | picture pattern matching | COMPLEXITIES | MULTIDISCIPLINARY SCIENCES | picture | picture language | circularly permuting picture processor
Journal Article
Structure, ISSN 0969-2126, 08/2019, Volume 27, Issue 8, pp. 1224 - 1233.e4
Journal Article
Journal Article
Journal Article
Journal of Biological Chemistry, ISSN 0021-9258, 11/2013, Volume 288, Issue 44, pp. 31616 - 31623
Journal Article
by Chang, HY and Ma, J and Yeh, J
TAIWANESE JOURNAL OF MATHEMATICS, ISSN 1027-5487, 12/2019, Volume 23, Issue 6, pp. 1303 - 1315
The circular descent of a permutation a is a set {sigma(i) vertical bar sigma(i) > sigma(i + 1)}. In this paper, we focus on the enumerations of permutations... 
MATHEMATICS | circular descent | generating tree | permutation tableaux | permutation
Journal Article
Chemical Communications, ISSN 1359-7345, 03/2014, Volume 50, Issue 32, pp. 4248 - 4250
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2016, Volume 1461, pp. 165 - 173
The present protocol demonstrates a new strategy for imaging ligand-triggered protein phosphorylation using circularly permutated luciferases (cpLuc): (1) a... 
Estrogen receptor | Bioluminescence | Phosphorylation | Circular permutation | Luciferase | Cell Line | Receptors, Estrogen - metabolism | Receptors, Estrogen - genetics | Cercopithecus aethiops | Luminescent Measurements - methods | Animals | Molecular Probes - metabolism | Protein Binding | Ligands | Kinetics | Mutation | Molecular Probes - genetics | COS Cells
Journal Article
Journal of Molecular Catalysis. B, Enzymatic, ISSN 1381-1177, 03/2016, Volume 125, pp. 75 - 80
Circular permutation (CP) involves the cleavage of polypeptide to obtain new termini, which can result in different protein structures and functions. It has... 
Circular permutation | Site-selection | Flexible loops | α/β-Hydrolase | Site-selectiona | α/βHydrolase | SYNTHASE | BIOCHEMISTRY & MOLECULAR BIOLOGY | LIBRARY | CHEMISTRY, PHYSICAL | alpha/beta-Hydrolase | LIPASE | CATALYTIC-ACTIVITY | THERMOSTABILITY | DIRECTED EVOLUTION
Journal Article
Methods in Molecular Biology, ISSN 1064-3745, 2017, Volume 1498, pp. 295 - 308
Rearrangements that alter the order of a protein's sequence are used in the lab to study protein folding, improve activity, and build molecular switches. One... 
Protein engineering | Library | Transposase | Circular permutation | Transposon | Proteins - genetics | Protein Engineering - methods | Transposases - genetics | DNA Transposable Elements - genetics | Mutagenesis - genetics | Amino Acid Sequence - genetics | Genetic Vectors - genetics | Protein Folding
Journal Article