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Computational and Theoretical Chemistry, ISSN 2210-271X, 10/2013, Volume 1021, pp. 155 - 163
Journal Article
Journal of Computational Chemistry, ISSN 0192-8651, 04/1999, Volume 20, Issue 6, pp. 636 - 654
A global optimization method is described for identifying the global minimum energy conformation, as well as lower and upper bounds on the global minimum... 
met‐enkephalin | protein folding | solvation | global optimization | leu‐enkephalin | Met-enkephalin | Global optimization | Solvation | Leu-enkephalin | Protein folding
Journal Article
Journal of Computational Chemistry, ISSN 0192-8651, 07/1997, Volume 18, Issue 9, pp. 1222 - 1232
A new optimization method is presented to search for the global minimum‐energy conformations of polypeptides. The method combines essential aspects of the... 
optimization method | conformational space annealing | global minimum‐energy conformations | polypeptides | Global minimum-energy conformations | Conformational space annealing | Polypeptides | Optimization method
Journal Article
JOURNAL OF COMPUTATIONAL CHEMISTRY, ISSN 0192-8651, 04/1999, Volume 20, Issue 6, pp. 636 - 654
A global optimization method is described for identifying the global minimum energy conformation, as well as lower and upper bounds on the global minimum... 
SOLVATION FREE-ENERGIES | ORGANIC-MOLECULES | DIFFERENTIABLE CONSTRAINED NLPS | solvation | PROTEIN-STRUCTURE | OPTIMIZATION METHOD | CHEMISTRY, MULTIDISCIPLINARY | global optimization | AQUEOUS-SOLUTION | met-enkephalin | ALPHA-BB | ACCESSIBLE SURFACE-AREAS | SHELL-MODEL | protein folding | SOLUTE MOLECULES | leu-enkephalin
Journal Article
Journal of Computational Chemistry, ISSN 0192-8651, 08/2000, Volume 21, Issue 11, pp. 999 - 1009
Dead‐end elimination (DEE) is a powerful theorem for selecting optimal protein side‐chain orientations from a large set of discrete conformations. The present... 
dead‐end elimination | side‐chain placement | conformational splitting | global minimum energy conformation | protein design | Dead-end elimination | Global minimum energy conformation | Conformational splitting | Protein design | Side-chain placement
Journal Article
JOURNAL OF COMPUTATIONAL CHEMISTRY, ISSN 0192-8651, 08/2000, Volume 21, Issue 11, pp. 999 - 1009
Dead-end elimination (DEE) is a powerful theorem for selecting optimal protein side-chain orientations from a large set of discrete conformations. The present... 
side-chain placement | DESIGN | global minimum energy conformation | THEOREM | PROTEIN SIDE-CHAINS | dead-end elimination | conformational splitting | protein design | CHEMISTRY, MULTIDISCIPLINARY
Journal Article
JOURNAL OF COMPUTATIONAL CHEMISTRY, ISSN 0192-8651, 07/1997, Volume 18, Issue 9, pp. 1222 - 1232
A new optimization method is presented to search for the global minimum-energy conformations of polypeptides. The method combines essential aspects of the... 
TESTS | conformational space annealing | MINIMIZATION | MULTIPLE-MINIMA PROBLEM | BUILDUP | global minimum-energy conformations | CHEMISTRY | K DY CHEMISTRY | MONTE-CARLO METHOD | optimization method | polypeptides | ENKEPHALIN
Journal Article
Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), ISSN 0302-9743, 2015, Volume 9029, pp. 354 - 366
Conference Proceeding
Journal of Global Optimization, ISSN 0925-5001, 03/1994, Volume 4, Issue 2, pp. 135 - 170
Journal Article
International Journal of Quantum Chemistry, ISSN 0020-7608, 1999, Volume 75, Issue 3, pp. 255 - 265
A successful implementation of a parallel version of a conformational space annealing (CSA) method is presented. The CSA method, an optimization procedure for... 
parallel computation | protein folding | global minimum‐energy conformation | conformational space annealing | ECEPP/3 | Conformational space annealing | Parallel computation | Protein folding | Global minimum-energy conformation
Journal Article
INTERNATIONAL JOURNAL OF QUANTUM CHEMISTRY, ISSN 0020-7608, 11/1999, Volume 75, Issue 3, pp. 255 - 265
A successful implementation of a parallel version of a conformational space annealing (CSA) method is presented. The CSA method, an optimization procedure for... 
parallel computation | NONBONDED INTERACTIONS | conformational space annealing | HYDROGEN-BOND INTERACTIONS | ALGORITHM | CHEMISTRY, PHYSICAL | MONTE-CARLO METHOD | POTENTIALS | POLYPEPTIDES | OCCURRING AMINO-ACIDS | protein folding | OPTIMIZATION | ENERGY PARAMETERS | global minimum-energy conformation | GEOMETRICAL PARAMETERS | ECEPP/3
Journal Article
Proteins: Structure, Function, and Bioinformatics, ISSN 0887-3585, 03/2007, Volume 66, Issue 4, pp. 889 - 902
Journal Article