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1. Full Text Microbial community structure and its functional implications
by Fuhrman, Jed A
Nature, ISSN 0028-0836, 05/2009, Volume 459, Issue 7244, pp. 193 - 199
Marine microbial communities are engines of globally important processes, such as the marine carbon, nitrogen and sulphur cycles. Recent data on the structures... 
MICROORGANISMS | BIOGEOGRAPHY | BACTERIAL DIVERSITY | OCEAN | MULTIDISCIPLINARY SCIENCES | MARINE VIRUSES | NORTHWEST ATLANTIC | PATTERNS | MICRODIVERSITY | BIOMASS PRODUCTION | SEA | Marine Biology | Animals | Ecosystem | Greenhouse Effect | Genomics - methods | Genomics - trends | Water Microbiology | Microorganisms | Biogeochemistry | Microbial populations | Distribution | Microbial mutation | Environmental aspects | Research | Natural history | Studies | Bacteria | Organisms | Microbiology | Genes
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2. Full Text PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets
by Pinto, Ameet J and Raskin, Lutgarde
PLoS ONE, ISSN 1932-6203, 08/2012, Volume 7, Issue 8, p. e43093
As 16S rRNA gene targeted massively parallel sequencing has become a common tool for microbial diversity investigations, numerous advances have been made to... 
AMPLIFICATION | TEMPERATURE | HIGH-THROUGHPUT | MICROBIAL DIVERSITY | DNA | MULTIDISCIPLINARY SCIENCES | DEEP-SEA | GENES | SPECIES RICHNESS | RARE BIOSPHERE | EFFICIENCY | Genes, Bacterial | Computational Biology - methods | Reproducibility of Results | Genes, Archaeal | Databases, Genetic | Molecular Sequence Data | DNA Primers - genetics | Genetic Techniques | Bacteria - genetics | Polymerase Chain Reaction - methods | RNA, Ribosomal, 16S - genetics | Archaea - genetics | Sequence Analysis, DNA - methods | RNA | Multiprocessing | Analysis | Quality control | Nucleotide sequencing | Biological diversity | DNA sequencing | Community structure | Multiplexing | rRNA 16S | Communities | Ecosystems | Taxonomy | Genes | Bias | Bar codes | Abundance | Genomes | Multiculturalism & pluralism | Environmental engineering | Gene sequencing | Datasets | Artifacts | Microorganisms | Quality | Data sets | Relative abundance | Phylogenetics | Bacteria | Deoxyribonucleic acid--DNA | Deoxyribonucleic acid
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3. Full Text Soil bacterial community structure in Chinese wetlands
by An, Jiaxing and Liu, Chi and Wang, Qian and Yao, Minjie and Rui, Junpeng and Zhang, Shiheng and Li, Xiangzhen
Geoderma, ISSN 0016-7061, 03/2019, Volume 337, pp. 290 - 299
Soil microbial communities are crucial in maintaining the functions of wetland ecosystems. Understanding the microbial community structure and the key factors... 
Wetland soils | Spatial distribution | Community assemblage | Environmental filtering | Bacterial community | PATTERNS | QINGHAI-TIBETAN PLATEAU | GRADIENT | SOIL SCIENCE | MICROBIAL BIOGEOGRAPHY | TEMPERATURE | METAGENOMICS | ORGANIC-CARBON | FUNGAL | BETA-DIVERSITY | VEGETATION | Microbiota (Symbiotic organisms) | Soil microbiology | Biological diversity | Wetlands
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4. Full Text Linking microbial community structure, interactions and function in anaerobic digesters using new molecular techniques
by Vanwonterghem, Inka and Jensen, Paul D and Ho, Dang P and Batstone, Damien J and Tyson, Gene W
Current Opinion in Biotechnology, ISSN 0958-1669, 2013, Volume 27, pp. 55 - 64
Graphical abstract 
Internal Medicine | MICROORGANISMS | METABOLOMICS | METABOLISM | SEQUENCES | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BIOCHEMICAL RESEARCH METHODS | DYNAMICS | DIVERSITY | SCALE | BACTERIAL | IDENTIFICATION | PROTEOMICS | Anaerobiosis | Genome, Bacterial - genetics | Metabolomics | Metagenomics | Metabolic Networks and Pathways - genetics | Microbial Interactions - genetics | Bioreactors - microbiology | Proteomics | Transcriptome | Conserved Sequence | Biotechnology | Microorganisms | Dynamic tests | Molecular structure | Reactors | Communities | Performance measurement | Digesters
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5. Full Text Effect of biochar additions to soil on nitrogen leaching, microbial biomass and bacterial community structure
by Xu, Nan and Tan, Guangcai and Wang, Hongyuan and Gai, Xiapu
European Journal of Soil Biology, ISSN 1164-5563, 05/2016, Volume 74, pp. 1 - 8
Previous studies already demonstrated that biochar addition reduces nitrogen (N) leaching in soil, but little information is available about its effects on N... 
High-throughput sequencing | Biochar | Microbial biomass | Bacterial community structure | Nitrogen leaching | Urea | Electrical conductivity | RNA | Analysis | Non-point source pollution | Leaching | Electric properties | Soil microbiology
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6. Full Text Factors affecting soil microbial community structure in tomato cropping systems
by Buyer, Jeffrey S and Teasdale, John R and Roberts, Daniel P and Zasada, Inga A and Maul, Jude E
Soil Biology and Biochemistry, ISSN 0038-0717, 2010, Volume 42, Issue 5, pp. 831 - 841
Soil and rhizosphere microbial communities in agroecosystems may be affected by soil, climate, plant species, and management. The management and environmental... 
Rhizosphere | PLFA | Hairy vetch | Soil | Mulch | Tomato | Microbial community | Rye | PLANT | CARBON | MANAGEMENT | BACTERIAL | LEVEL | RIBOSOMAL-RNA | FATTY-ACID PROFILES | SOIL SCIENCE | BIOMASS | NITROGEN | COVER CROPS
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7. Full Text Dynamics of the bacterial community structure in the rhizosphere of a maize cultivar
by Li, Xiangzhen and Rui, Junpeng and Mao, Yuejian and Yannarell, Anthony and Mackie, Roderick
Soil Biology and Biochemistry, ISSN 0038-0717, 01/2014, Volume 68, pp. 392 - 401
Rhizosphere bacteria have significant contributions to crop health, productivity and carbon sequestration. As maize ( ) is an important economic crop, its... 
Predominant bacterial genera | Root exudates | Dynamics | Plant growth stage | Pyrosequencing | Maize rhizosphere | Bacterial community structure | LIMITATIONS | ZEA-MAYS | POPULATIONS | RIBOSOMAL-RNA | GRADIENT GEL-ELECTROPHORESIS | ALIGNMENTS | SOIL SCIENCE | MICROBIAL COMMUNITIES | SOIL TYPE | DIVERSITY | PLANT-GROWTH STAGES | Corn | Bacteria | Analysis
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8. Full Text Pyrosequencing-Based Assessment of Soil pH as a Predictor of Soil Bacterial Community Structure at the Continental Scale
by Christian L. Lauber and Micah Hamady and Rob Knight and Noah Fierer
Applied and Environmental Microbiology, ISSN 0099-2240, 08/2009, Volume 75, Issue 15, pp. 5111 - 5120
Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit... 
MICROORGANISMS | TAXA | MICROBIAL BIOGEOGRAPHY | MANAGEMENT | MEMBERS | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | LAND-USE | CLASSIFICATION | PATTERNS | MICROBIOLOGY | DIVERSITY | 16S RIBOSOMAL-RNA | South America | Bacteria - isolation & purification | DNA, Bacterial - genetics | Soil Microbiology | Bacteria - classification | DNA, Bacterial - chemistry | Soil - analysis | Biodiversity | Bacteria - genetics | North America | Sequence Analysis, DNA - methods | Hydrogen-Ion Concentration | Biogeography | Usage | Cladistic analysis | Research | Analysis | Soil microbiology | Community composition | Environmental Microbiology
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9. Full Text Links between Ammonia Oxidizer Community Structure, Abundance, and Nitrification Potential in Acidic Soils
by Huaiying Yao and Yangmei Gao and Graeme W. Nicol and Colin D. Campbell and James I. Prosser and Limei Zhang and Wenyan Han and Brajesh K. Singh
Applied and Environmental Microbiology, ISSN 0099-2240, 07/2011, Volume 77, Issue 13, pp. 4618 - 4625
Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit... 
TEA ORCHARD SOILS | N MINERALIZATION | ENZYME-ACTIVITIES | MICROBIAL BIOMASS | ARCHAEA | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | BACTERIAL COMMUNITIES | LAND-USE | MICROBIOLOGY | DIVERSITY | GRASSLAND SOILS | RED SOIL | DNA, Archaeal - genetics | Trees | Bacteria - metabolism | DNA, Archaeal - chemistry | Oxidation-Reduction | Ammonia - metabolism | Soil Microbiology | Molecular Sequence Data | DNA, Bacterial - chemistry | Phylogeny | Pinus | Biodiversity | Sequence Analysis, DNA | Tea | Archaea - metabolism | DNA, Bacterial - genetics | Polymorphism, Restriction Fragment Length | Nitrification | Soil - chemistry | Cluster Analysis | Hydrogen-Ion Concentration | Physiological aspects | Nitrogen-fixing microorganisms | Research | Archaeabacteria | Soil microbiology | Index Medicus | Microbial Ecology
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10. Full Text Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
by Urich, Tim and Lanzén, Anders and Qi, Ji and Huson, Daniel H and Schleper, Christa and Schuster, Stephan C
PLoS ONE, ISSN 1932-6203, 06/2008, Volume 3, Issue 6, pp. e2527 - e2527
Background: Soil ecosystems harbor the most complex prokaryotic and eukaryotic microbial communities on Earth. Experimental approaches studying these systems... 
MULTIDISCIPLINARY SCIENCES | RNA, Bacterial - genetics | Species Specificity | Soil Microbiology | RNA, Ribosomal - genetics | Ecosystem | RNA, Messenger - genetics | RNA | Ecosystems | Analysis | Soil microbiology | Microbial activity | Trophic levels | Communities | Taxonomy | Genomics | Bias | Ribosomal DNA | Carbon dioxide | Genomes | Biology | Gene sequencing | Taxa | Phylogenetics | Oxidation | Life sciences | Trends | Carbon capture and storage | Bioinformatics | Deoxyribonucleic acid--DNA | Tags | Community structure | Automation | rRNA | Cloning | Soil structure | Abundance | Ecology | Gene expression | Ribonucleic acid--RNA | Carbon | Studies | Polymerase chain reaction | Ammonia | Soils | Geobiology | Fixation | Soil microorganisms | Relative abundance | Methods | Structure-function relationships | Deoxyribonucleic acid | Ribonucleic acid | DNA
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