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Nature Protocols, ISSN 1754-2189, 06/2015, Volume 10, Issue 6, pp. 845 - 858
Phyre2 is a suite of tools available on the web to predict and analyze protein structure, function and mutations. The focus of Phyre2 is to provide biologists... 
SITES | DATABASE | RESIDUES | BIOCHEMICAL RESEARCH METHODS | Models, Molecular | Protein Conformation | Software | Internet | Computational Biology | Web portals | Proteins | Usage | Models | Structure | homology modelling | protein modelling server | nsSNPs | CASP | disease variants | structural bioinformatics | protein structure prediction | poing | protein modelling | phyre2
Journal Article
Meta Gene, ISSN 2214-5400, 02/2020, Volume 23, p. 100626
Cancer is a deadly disease caused by several factors such as variations in genes that influence cell growth and division. Wnt pathway is commonly involved in... 
nsSNPs | Protein docking | Wnt pathway | In silico analysis | Cancer
Journal Article
Meta Gene, ISSN 2214-5400, 09/2016, Volume 9, pp. 237 - 248
Autophagy is an essential, homeostatic process which removes damaged cellular proteins and organelles for cellular renewal. ATG5, a part of E3 ubiquitin... 
nsSNPs | Palmitoylation | Autophagy | Ubiquitylation | ATG5
Journal Article
Metabolic brain disease, ISSN 0885-7490, 08/2019
Mucopolysaccharidosis (MPS) IIIA, also known as Sanfilippo syndrome type A, is a severe, progressive disease that affects the central nervous system (CNS).... 
Journal Article
Journal of Cellular Biochemistry, ISSN 0730-2312, 01/2018, Volume 119, Issue 1, pp. 555 - 565
ABSTRACT Mucopolysaccharidosis type I is a lysosomal genetic disorder caused due to the deficiency of the α‐L‐iduronidase enzyme (IDUA). Mutations associated... 
nsSNPs | IN SILICO | IDUA | MOLECULAR DYNAMICS | DELETERIOUS | Humans | Mucopolysaccharidosis I - enzymology | Mucopolysaccharidosis I - genetics | Polymorphism, Single Nucleotide | Mutation | DNA Mutational Analysis - methods | Iduronidase - genetics
Journal Article
Free Radical Biology and Medicine, ISSN 0891-5849, 12/2018, Volume 129, pp. 486 - 491
The development of high-throughput technologies in the last decade produced an exponential increase in the amount of biological data available. The case of... 
Oxidative stress | NsSNPs | GSTP1 | Protein | In silico study | Apoptosis | GLUTATHIONE TRANSFERASES | GENE | BIOCHEMISTRY & MOLECULAR BIOLOGY | ENDOCRINOLOGY & METABOLISM | CELL-PROLIFERATION | CANCER | Amino acids | Single nucleotide polymorphisms | Glutathione transferase | Analysis
Journal Article
Journal of Biomolecular Structure and Dynamics, ISSN 0739-1102, 09/2019, Volume 37, Issue 13, pp. 3513 - 3523
Solute carrier family 24 member 5 (SLC24A5) is a gene that is associated with oculocutaneous albinism type 6 (OCA6) disorder and is involved in skin and hair... 
ab initio modelling | nsSNPs | mutations | OCA | molecular dynamics simulation | PROTEIN | BIOPHYSICS | BIOCHEMISTRY & MOLECULAR BIOLOGY | INHIBITORS | SLC24A5 | NATURAL COMPOUNDS | EXCHANGER
Journal Article
Meta Gene, ISSN 2214-5400, 09/2017, Volume 13, pp. 38 - 47
ATG5 is an essential autophagy related protein that acts as an E3-like activating enzyme of ubiquitin-like conjugating system in conjunction with ATG12 and... 
A95D | nsSNPs | Autophagy | ATG12–ATG5/ATG16L1 | M129V | ATG5
Journal Article
Research Journal of Biotechnology, ISSN 0973-6263, 09/2018, Volume 13, Issue 9, pp. 35 - 47
Journal Article
Meta Gene, ISSN 2214-5400, 09/2018, Volume 17, pp. 153 - 162
Adducins help stabilize the spectrin-actin interactions along with other accessory cytoskeletal proteins. Adducins exist as a tetramer composed of either α/β... 
Pathogenicity | In silico | mRNA | Alpha-adducin | nsSNP
Journal Article
Meta Gene, ISSN 2214-5400, 09/2018, Volume 17, pp. 136 - 140
CD14 is a multifunctional pattern recognition receptor, which works in concert with several other toll-like receptors and activates downstream immune response.... 
PRR | nsSNPs | Protein-protein interaction | Lipopolysaccharide | Toll-like receptors | In silico | Innate immunity | CD14
Journal Article
Frontiers in Microbiology, ISSN 1664-302X, 02/2016, Volume 7, p. 192
Pentraxin-3 (PTX-3) protein is an evolutionary conserved protein that acts as a soluble pattern-recognition receptor for pathogens and plays important role in... 
Lipopolysaccharide | In silico | Galactomannan | PTX-3 | Aspergillus fumigatus | NsSNPs | C-REACTIVE PROTEIN | CELLS | galactomannan | PHYSICAL REALISM | MICROBIOLOGY | PREDICTION | ACCURACY | ASPERGILLOSIS | nsSNPs | SEQUENCE | PTX3 | MUTATIONS | lipopolysaccharide | CHAIN PENTRAXIN | In-silico
Journal Article
Journal Article