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Fungal Genetics and Biology, ISSN 1087-1845, 11/2014, Volume 72, pp. 34 - 47
Journal Article
Fungal Genetics and Biology, ISSN 1087-1845, 05/2017, Volume 102, pp. 4 - 21
[Display omitted] •First genome-wide transcriptional response in fungal mixed species straw cultures.•In mixed cultures, rRNA abundance was used to predict... 
Competition | Dual RNA-seq | Lignocellulose | Aspergillus niger | Mixed cultures | Trichoderma reesei | Penicillium chrysogenum | ASPERGILLUS-NIGER | CARBON STARVATION | SECONDARY METABOLISM | TRICHODERMA-REESEI | WHEAT-STRAW | BIOMASS-DEGRADING ENZYMES | SYSTEMS-ANALYSIS | GENETICS & HEREDITY | GENE-EXPRESSION | PENICILLIUM-CHRYSOGENUM | NIDULANS | MYCOLOGY | Hydrolases - metabolism | Hydrolases - genetics | Coculture Techniques | Carbohydrate Metabolism | Transcriptome | Aspergillus niger - enzymology | Ascomycota - enzymology | Trichoderma - genetics | Biomass | Fungal Proteins - genetics | Trichoderma - enzymology | Penicillium chrysogenum - genetics | Antibiosis | Lignin - metabolism | Sequence Analysis, RNA | Aspergillus niger - genetics | Ascomycota - genetics | Penicillium chrysogenum - drug effects | Penicillium chrysogenum - enzymology | Fungal Proteins - metabolism | Fungi | RNA | Genetic transcription | Metabolites | Analysis | Genomics | FPKM, uniquely mapped Fragments Per Kilobase of gene model per Million uniquely mapped fragments | MWCO, molecular weight cut-off | Pc, Penicillium chrysogenum | pNP-α-Glc, 4-Nitrophenyl-α-d-glucopyranoside | CAZyme, carbohydrate active enzyme | padj, p value from DESeq analysis with adjustment for multiple hypothesis testing | pNP-β-Glc, 4-Nitrophenyl-β-d-glucopyranoside | CAZy, carbohydrate active enzyme or protein, as found in the CAZy database | An, Aspergillus niger | pNP-Xyl, 4-Nitrophenyl-β-d-xylopyranoside | pNP-Cel, 4-Nitrophenyl-β-d-cellobioside | pNP-Ara, 4-Nitrophenyl-α-l-arabinofuranoside | Tr, Trichoderma reesei
Journal Article
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