Molecular Ecology, ISSN 0962-1083, 11/2014, Volume 23, Issue 21, pp. 5151 - 5163
Sexual selection hypotheses stipulate that the major histocompatibility complex genes (MHC) constitute a key molecular underpinning for mate choice in...
meta‐regression | meta‐analysis | the major histocompatibility complex | MHC diversity | mate choice | genetic compatibility | meta-analysis | meta-regression | PARASITE RESISTANCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | MAJOR HISTOCOMPATIBILITY COMPLEX | SEXUAL SELECTION | EVOLUTIONARY BIOLOGY | PUBLICATION BIAS | EVOLUTION | NATURAL-SELECTION | CLASS-I | ECOLOGY | GOOD-GENES | SAND LIZARDS | DEPENDENT MATE CHOICE | Genetic Variation | Mating Preference, Animal | Major Histocompatibility Complex | Animals | Vertebrates - genetics | Female | Male | Phylogeny | Phylogenetics | Animal reproduction | Vertebrates | Evolution | Population genetics | Biological Sciences | diversity | Naturvetenskap | MHC | Biologi | Natural Sciences
meta‐regression | meta‐analysis | the major histocompatibility complex | MHC diversity | mate choice | genetic compatibility | meta-analysis | meta-regression | PARASITE RESISTANCE | BIOCHEMISTRY & MOLECULAR BIOLOGY | MAJOR HISTOCOMPATIBILITY COMPLEX | SEXUAL SELECTION | EVOLUTIONARY BIOLOGY | PUBLICATION BIAS | EVOLUTION | NATURAL-SELECTION | CLASS-I | ECOLOGY | GOOD-GENES | SAND LIZARDS | DEPENDENT MATE CHOICE | Genetic Variation | Mating Preference, Animal | Major Histocompatibility Complex | Animals | Vertebrates - genetics | Female | Male | Phylogeny | Phylogenetics | Animal reproduction | Vertebrates | Evolution | Population genetics | Biological Sciences | diversity | Naturvetenskap | MHC | Biologi | Natural Sciences
Journal Article
Oikos, ISSN 0030-1299, 02/2013, Volume 122, Issue 2, pp. 247 - 257
Determining how assembly rules (e.g. limiting similarity, environmental filtering and neutrality) shape community structure along environmental gradients and...
SPECIES-DIVERSITY | BIODIVERSITY | SOUTHEASTERN BRAZIL | NULL MODELS | DETERMINANTS | SOUTHERN BRAZIL | ECOLOGICAL COMMUNITIES | PHYLOGENETIC STRUCTURE | ECOLOGY | REDUNDANCY | LIMITING SIMILARITY | Trawling | Environmental aspects | Estuaries | Habitats | Fish
SPECIES-DIVERSITY | BIODIVERSITY | SOUTHEASTERN BRAZIL | NULL MODELS | DETERMINANTS | SOUTHERN BRAZIL | ECOLOGICAL COMMUNITIES | PHYLOGENETIC STRUCTURE | ECOLOGY | REDUNDANCY | LIMITING SIMILARITY | Trawling | Environmental aspects | Estuaries | Habitats | Fish
Journal Article
Parasitology, ISSN 0031-1820, 09/2017, Volume 144, Issue 10, pp. 1365 - 1374
We revisited the role of dissimilarity of host assemblages in shaping dissimilarity of flea assemblages using a non-linear approach. Generalized dissimilarity...
spatial scale | mammals | generalized dissimilarity modelling | fleas | biogeographic realms | SCALE-DEPENDENCE | NEW-SOUTH-WALES | GEOGRAPHICAL VARIATION | SPECIES COMPOSITION | BETA DIVERSITY | GLOBAL PATTERNS | NEGEV DESERT | FLEAS SIPHONAPTERA | SMALL MAMMALS | SPATIAL TURNOVER | PARASITOLOGY | Animals | Models, Biological | Parasitology - methods | Siphonaptera - physiology | Mammals - parasitology | Host-Parasite Interactions | Phylogeny | Biodiversity | Geography | Spatial discrimination | Biogeography | Data processing | Ecology | Parasites | Composition effects | Generalized linear models | Studies | Phylogenetics | Small mammals | Community composition
spatial scale | mammals | generalized dissimilarity modelling | fleas | biogeographic realms | SCALE-DEPENDENCE | NEW-SOUTH-WALES | GEOGRAPHICAL VARIATION | SPECIES COMPOSITION | BETA DIVERSITY | GLOBAL PATTERNS | NEGEV DESERT | FLEAS SIPHONAPTERA | SMALL MAMMALS | SPATIAL TURNOVER | PARASITOLOGY | Animals | Models, Biological | Parasitology - methods | Siphonaptera - physiology | Mammals - parasitology | Host-Parasite Interactions | Phylogeny | Biodiversity | Geography | Spatial discrimination | Biogeography | Data processing | Ecology | Parasites | Composition effects | Generalized linear models | Studies | Phylogenetics | Small mammals | Community composition
Journal Article
Oecologia, ISSN 0029-8549, 4/2016, Volume 180, Issue 4, pp. 933 - 940
While an increasing number of indices for estimating the functional trait diversity of biological communities are being proposed, there is a growing demand by...
Life Sciences | Hydrology/Water Resources | Biodiversity indices | Trait variance | Assembly rules | Ecology | Phylogenetic diversity | Plant Sciences | Community | SPECIES-DIVERSITY | UNIFIED APPROACH | MULTIPLE TRAITS | FRAMEWORK | ECOLOGY | INDEXES | Ecology - standards | Phenotype | Algorithms | Biodiversity | Models, Biological
Life Sciences | Hydrology/Water Resources | Biodiversity indices | Trait variance | Assembly rules | Ecology | Phylogenetic diversity | Plant Sciences | Community | SPECIES-DIVERSITY | UNIFIED APPROACH | MULTIPLE TRAITS | FRAMEWORK | ECOLOGY | INDEXES | Ecology - standards | Phenotype | Algorithms | Biodiversity | Models, Biological
Journal Article
Forest Ecology and Management, ISSN 0378-1127, 01/2019, Volume 432, pp. 983 - 990
Enhancement and conservation of biodiversity in recovering communities is one of the primary goals of forest ecology and restoration. To achieve a better...
Community assembly | Taxonomic dissimilarity | Plantation | Restoration | Phylogenetic dissimilarity | SUCCESSION EVIDENCE | NICHES | TAXA | COMPETITIVE-EXCLUSION | ALIEN PLANTS | DARWINS NATURALIZATION HYPOTHESIS | VEGETATION DYNAMICS | DIVERSITY | FORESTRY | SIMILARITY | Biological diversity conservation | Ecosystems | Plantations | Stochastic processes | Forest ecology | Forest management | Ecological restoration | Phylogeny | Biological diversity
Community assembly | Taxonomic dissimilarity | Plantation | Restoration | Phylogenetic dissimilarity | SUCCESSION EVIDENCE | NICHES | TAXA | COMPETITIVE-EXCLUSION | ALIEN PLANTS | DARWINS NATURALIZATION HYPOTHESIS | VEGETATION DYNAMICS | DIVERSITY | FORESTRY | SIMILARITY | Biological diversity conservation | Ecosystems | Plantations | Stochastic processes | Forest ecology | Forest management | Ecological restoration | Phylogeny | Biological diversity
Journal Article
BMC Genomics, ISSN 1471-2164, 08/2016, Volume 17, Issue 1, p. 647
Background: Identification and classification of highly similar microbial strains is a challenging issue in microbiology, ecology and evolutionary biology....
Genomic fluidity | Microbial subclassification | Highly similar strains | Gene content dissimilarity | SEQUENCES | S-MITIS | SPECIES DEFINITION | ESCHERICHIA-COLI | BACTERIAL GENOMES | STREPTOCOCCUS-PNEUMONIAE | EVOLUTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | GENOME PHYLOGENETIC ANALYSIS | PROKARYOTES | ENTEROBACTERIACEAE | Computational Biology - methods | Metagenomics - methods | Enterobacteriaceae - genetics | RNA, Ribosomal, 16S - genetics | DNA Barcoding, Taxonomic | Databases, Nucleic Acid | Metagenome | Cluster Analysis | Enterobacteriaceae - classification | Genome, Microbial | Microorganisms | Evolutionary biology | Analysis | Genotype | Hybridization | Research | Identification and classification
Genomic fluidity | Microbial subclassification | Highly similar strains | Gene content dissimilarity | SEQUENCES | S-MITIS | SPECIES DEFINITION | ESCHERICHIA-COLI | BACTERIAL GENOMES | STREPTOCOCCUS-PNEUMONIAE | EVOLUTION | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | GENETICS & HEREDITY | GENOME PHYLOGENETIC ANALYSIS | PROKARYOTES | ENTEROBACTERIACEAE | Computational Biology - methods | Metagenomics - methods | Enterobacteriaceae - genetics | RNA, Ribosomal, 16S - genetics | DNA Barcoding, Taxonomic | Databases, Nucleic Acid | Metagenome | Cluster Analysis | Enterobacteriaceae - classification | Genome, Microbial | Microorganisms | Evolutionary biology | Analysis | Genotype | Hybridization | Research | Identification and classification
Journal Article
Environmental Microbiology, ISSN 1462-2912, 05/2016, Volume 18, Issue 5, pp. 1523 - 1533
Summary Many studies have investigated patterns in the near‐surface soil microbial community over large spatial scales. However, less is known about variation...
CALIFORNIA GRASSLAND | MICROBIAL COMMUNITIES | BIOGEOGRAPHY | ORGANIC-CARBON | BIOMASS | PHYLOGENETIC STRUCTURE | PATTERNS | MICROBIOLOGY | BETA-DIVERSITY | 16S RIBOSOMAL-RNA | Soil - classification | Nitrogen - analysis | Soil Microbiology | Soil - chemistry | Bacteria - classification | Carbon - analysis | Phylogeny | Tibet | Bacteria - genetics | Soils | Analysis | Soil microbiology | Herbivores
CALIFORNIA GRASSLAND | MICROBIAL COMMUNITIES | BIOGEOGRAPHY | ORGANIC-CARBON | BIOMASS | PHYLOGENETIC STRUCTURE | PATTERNS | MICROBIOLOGY | BETA-DIVERSITY | 16S RIBOSOMAL-RNA | Soil - classification | Nitrogen - analysis | Soil Microbiology | Soil - chemistry | Bacteria - classification | Carbon - analysis | Phylogeny | Tibet | Bacteria - genetics | Soils | Analysis | Soil microbiology | Herbivores
Journal Article
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Full Text
Inferring and Validating Horizontal Gene Transfer Events Using Bipartition Dissimilarity
Systematic Biology, ISSN 1063-5157, 3/2010, Volume 59, Issue 2, pp. 195 - 211
Horizontal gene transfer (HGT) is one of the main mechanisms driving the evolution of microorganisms. Its accurate identification is one of the major...
Leaves | Biological taxonomies | Algorithms | Minimization of cost | Genes | Plant roots | Phylogenetics | Evolution | Phylogeny | Topology | Phylogenetic tree | Quartet distance | Least squares | Bipartition dissimilarity | Bootstrap analysis | Robinson and Foulds topological distance | Horizontal gene transfer | bootstrap analysis | SUBSTITUTION | phylogenetic tree | MAXIMUM-LIKELIHOOD | quartet distance | PHYLOGENETIC NETWORKS | ALGORITHMS | SIMULATION | horizontal gene transfer | RATES | EVOLUTIONARY BIOLOGY | TREES | GENOMES | least squares | HISTORICAL ASSOCIATIONS | SEQUENCE EVOLUTION | Data Interpretation, Statistical | Classification - methods | Models, Genetic | Gene Transfer, Horizontal - genetics | Evolution, Molecular
Leaves | Biological taxonomies | Algorithms | Minimization of cost | Genes | Plant roots | Phylogenetics | Evolution | Phylogeny | Topology | Phylogenetic tree | Quartet distance | Least squares | Bipartition dissimilarity | Bootstrap analysis | Robinson and Foulds topological distance | Horizontal gene transfer | bootstrap analysis | SUBSTITUTION | phylogenetic tree | MAXIMUM-LIKELIHOOD | quartet distance | PHYLOGENETIC NETWORKS | ALGORITHMS | SIMULATION | horizontal gene transfer | RATES | EVOLUTIONARY BIOLOGY | TREES | GENOMES | least squares | HISTORICAL ASSOCIATIONS | SEQUENCE EVOLUTION | Data Interpretation, Statistical | Classification - methods | Models, Genetic | Gene Transfer, Horizontal - genetics | Evolution, Molecular
Journal Article
Oikos, ISSN 0030-1299, 12/2016, Volume 125, Issue 12, pp. 1719 - 1732
Ecological studies have now gone beyond measures of species turnover towards measures of phylogenetic and functional dissimilarity. This change of perspective...
BIODIVERSITY | SIMILARITY INDEXES | FUNCTIONAL DIVERSITY | HILL NUMBERS | COMMUNITY | COEFFICIENTS | FRAMEWORK | PATTERNS | ECOLOGY | BETA-DIVERSITY | METACOMMUNITY PHYLOGENETICS | Phylogeny | Phylogenetics | Bats | Evolution | Biodiversity and Ecology | Environmental Sciences
BIODIVERSITY | SIMILARITY INDEXES | FUNCTIONAL DIVERSITY | HILL NUMBERS | COMMUNITY | COEFFICIENTS | FRAMEWORK | PATTERNS | ECOLOGY | BETA-DIVERSITY | METACOMMUNITY PHYLOGENETICS | Phylogeny | Phylogenetics | Bats | Evolution | Biodiversity and Ecology | Environmental Sciences
Journal Article
Journal of Ecology, ISSN 0022-0477, 11/2018, Volume 106, Issue 6, pp. 2230 - 2241
Plant invasions can drastically change the structure of native communities, but it is not fully understood whether alien species occupy phylogenetic and...
functional diversity | Darwin’s naturalization hypothesis | niche differentiation | functional traits | phylogenetic diversity | environmental filtering | invasion ecology | community trait means | METAANALYSIS | PLANT INVASIONS | DARWINS NATURALIZATION CONUNDRUM | PLANT SCIENCES | EUROPEAN FLORA | RELATEDNESS | DATABASE | Darwin's naturalization hypothesis | FRAMEWORK | ECOLOGY | INVASION SUCCESS | TRAITS | ECOSYSTEMS | Evolution | Phylogeny | Niche (Ecology) | Indigenous peoples | Introduced species | Filtration | Habitats | Communities | Terrestrial environments | Plant communities | Plant populations | Biodiversity | Variance analysis | Lacunas | Species diversity | Invasive species | Vegetation | Phylogenetics | Indigenous species | Habitat | Herbivores | Community | Native species
functional diversity | Darwin’s naturalization hypothesis | niche differentiation | functional traits | phylogenetic diversity | environmental filtering | invasion ecology | community trait means | METAANALYSIS | PLANT INVASIONS | DARWINS NATURALIZATION CONUNDRUM | PLANT SCIENCES | EUROPEAN FLORA | RELATEDNESS | DATABASE | Darwin's naturalization hypothesis | FRAMEWORK | ECOLOGY | INVASION SUCCESS | TRAITS | ECOSYSTEMS | Evolution | Phylogeny | Niche (Ecology) | Indigenous peoples | Introduced species | Filtration | Habitats | Communities | Terrestrial environments | Plant communities | Plant populations | Biodiversity | Variance analysis | Lacunas | Species diversity | Invasive species | Vegetation | Phylogenetics | Indigenous species | Habitat | Herbivores | Community | Native species
Journal Article
Parasitology, ISSN 0031-1820, 03/2012, Volume 139, Issue 3, pp. 338 - 347
We tested the hypothesis that compositional and/or phylogenetic dissimilarity of host assemblages affect compositional and/or phylogenetic dissimilarity of...
ectoparasites | faunal history | mammalian hosts | phylogenetic community dissimilarity | spatial scale | SPECIES COMPOSITION | BETA DIVERSITY | PATTERNS | PARASITE COMMUNITIES | DISTANCE DECAY | COSPECIATION | SPATIAL VARIATION | SMALL MAMMALIAN HOSTS | SIMILARITY | PARASITOLOGY | FLEA ASSEMBLAGES | Regression Analysis | Animals | Tropical Climate | Arctic Regions | Biota | Phylogeography | Siphonaptera - physiology | Mammals - parasitology | Host-Parasite Interactions | Phylogeny | Biodiversity | Population Dynamics | Geographical variations
ectoparasites | faunal history | mammalian hosts | phylogenetic community dissimilarity | spatial scale | SPECIES COMPOSITION | BETA DIVERSITY | PATTERNS | PARASITE COMMUNITIES | DISTANCE DECAY | COSPECIATION | SPATIAL VARIATION | SMALL MAMMALIAN HOSTS | SIMILARITY | PARASITOLOGY | FLEA ASSEMBLAGES | Regression Analysis | Animals | Tropical Climate | Arctic Regions | Biota | Phylogeography | Siphonaptera - physiology | Mammals - parasitology | Host-Parasite Interactions | Phylogeny | Biodiversity | Population Dynamics | Geographical variations
Journal Article