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04/2013
Rain-induced cracking in fruits of sweet cherry ( Prunus avium [L.]) is a problem in most producing areas of the world and causes significant economic losses.... 
RNA seq | Physiology | functional genomics
Web Resource
Journal of Neuroscience, ISSN 0270-6474, 03/2018, Volume 38, Issue 10, pp. 2399 - 2412
Journal Article
FEBS Journal, ISSN 1742-464X, 02/2010, Volume 277, Issue 4, pp. 856 - 866
Journal Article
Eukaryotic Cell, ISSN 1535-9778, 2012, Volume 11, Issue 11, pp. 1413 - 1414
We report here an update of the Botrytis cinerea strains B05.10 and T4 genomes, as well as an automated preliminary gene structure annotation. High-coverage de... 
rna-seq
Journal Article
BMC Genomics, ISSN 1471-2164, 12/2019, Volume 20, Issue 1, pp. 1 - 14
Abstract Background Cytoplasmic incompatibility (CI) is the most common phenotype induced by endosymbiont Wolbachia and results in embryonic lethality when... 
Ovary | RNA-seq | miRNAs | Wolbachia | Drosophila melanogaster
Journal Article
Genomics, ISSN 0888-7543, 2019
The marbling rate evaluation is difficult and expensive, requiring slaughter of the animal or ultrasound measurement. Thus, this trait is generally not... 
RNA-Seq | Transcriptome | Intramuscular fat | Meat quality
Journal Article
NATURE METHODS, ISSN 1548-7091, 01/2014, Volume 11, Issue 1, pp. 41 - 41
Interest in single-cell whole-transcriptome analysis is growing rapidly, especially for profiling rare or heterogeneous populations of cells. We compared... 
HETEROGENEITY | SPLICE JUNCTIONS | STEM-CELLS | PHAGOCYTOSIS | EXPRESSION ANALYSIS | AMPLIFICATION | ALIGNMENT | LANDSCAPE | BIOCHEMICAL RESEARCH METHODS | MESSENGER-RNA-SEQ | TUMORS
Journal Article
Scientific Reports, ISSN 2045-2322, 12/2017, Volume 7, Issue 1, pp. 16252 - 16252
In the life sciences, many assays measure only the relative abundances of components in each sample. Such data, called compositional data, require special... 
RNA-SEQ | MULTIDISCIPLINARY SCIENCES | Data processing
Journal Article
Circulation research, ISSN 0009-7330, 6/2018, Volume 122, Issue 12, pp. 1632 - 1634
Journal Article
Genomics, ISSN 0888-7543, 2018
Sweetpotato (Ipomoea batatas L.) is a globally important economic food crop. It belongs to Convolvulaceae family and origins in the tropics; however,... 
Storage | Sweetpotato | RNA-seq | Chilling | Transcriptome
Journal Article
Investigative ophthalmology & visual science, 06/2018, Volume 59, Issue 7, p. 2717
Keratoconus (KC) is the most common corneal ectasia. We aimed to determine the differential expression of coding and long noncoding RNAs (lncRNAs) in human... 
Journal Article
CELL, ISSN 0092-8674, 12/2016, Volume 167, Issue 6, pp. 1495 - 1495
The intestinal microbiota undergoes diurnal compositional and functional oscillations that affect metabolic homeostasis, but the mechanisms by which the... 
CIRCADIAN CLOCK | HOMEOSTASIS | METABOLISM | ACETAMINOPHEN | ALIGNMENT | RNA-SEQ | LANDSCAPE | BIOCHEMISTRY & MOLECULAR BIOLOGY | GENE-EXPRESSION | TIME | PROMOTES | CELL BIOLOGY
Journal Article
Scientia Horticulturae, ISSN 0304-4238, 11/2019, Volume 257
Mangosteen ( L.) is an apomictic tropical fruit tree species which asexually produces recalcitrant seeds that are sensitive to desiccation and not viable for... 
SeedNet | RNA-seq | Germination | Mangosteen | Recalcitrant | Apomict
Journal Article
Plant Science, ISSN 0168-9452, 11/2016, Volume 252, pp. 324 - 334
Thailand’s aromatic coconut ( L.) is a special type of green dwarf coconut, the liquid endosperm of which is characterized by a pleasant “pandan-like” aroma... 
Aroma | RNA-seq | BADH | AMADH | Coconut | 2-acetyl-1-pyrroline
Journal Article
International journal of molecular sciences, ISSN 1422-0067, 04/2019, Volume 20, Issue 9, p. 2099
Embryo implantation in the follows the pattern of many carnivores, in that preimplantation embryo diapause occurs in every gestation. Details of the gene... 
embryo diapauses | mink | uterus | RNA-seq | activated
Journal Article
Genome Biology, ISSN 1474-7596, 10/2010, Volume 11, Issue 10, pp. R106 - R106
High-throughput sequencing assays such as RNA-Seq, ChIP-Seq or barcode counting provide quantitative readouts in the form of count data. To infer differential... 
NEGATIVE BINOMIAL DISPERSION | RNA-SEQ | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | PACKAGE | GENETICS & HEREDITY | BIOCONDUCTOR | Index Medicus | Method
Journal Article
NATURE REVIEWS CLINICAL ONCOLOGY, ISSN 1759-4774, 10/2017, Volume 14, Issue 10, pp. 590 - U20
Important biological questions can be addressed by interrogating the transcriptomes of cancer cells. In a recently published landmark study, Giustacchini and... 
MUTATIONS | ONCOLOGY | RNA-SEQ | CHRONIC MYELOID-LEUKEMIA
Journal Article
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