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Cell (Cambridge), ISSN 0092-8674, 2018, Volume 174, Issue 4, pp. 999 - 1014.e22
The mammalian nervous system executes complex behaviors controlled by specialized, precisely positioned, and interacting cell types. Here, we used RNA... 
RNA sequencing | transcriptomics | single-cell transcriptomics | cell type | classification | HETEROGENEITY | ATLAS | ORIGIN | TRANSPORTERS | BIOCHEMISTRY & MOLECULAR BIOLOGY | TRANSCRIPTION | BARRIER | NEURONS | MESSENGER-RNA-SEQ | CELL-TYPES | CELL BIOLOGY | RNA | Neurons | Neuropeptides | Genetic engineering | Glycine | Glutamate | Neurophysiology
Journal Article
by Campbell, Joshua D and Yau, Christina and Bowlby, Reanne and Liu, Yuexin and Brennan, Kevin and Fan, Huihui and Taylor, Alison M and Wang, Chen and Walter, Vonn and Akbani, Rehan and Byers, Lauren Averett and Creighton, Chad J and Coarfa, Cristian and Cherniack, Andrew D and Gevaert, Olivier and Prunello, Marcos and Shen, Hui and Chen, Jianhong and Cheng, Hui and Hayes, D. Neil and Bullman, Susan and Pedamallu, Chandra Sekhar and Ojesina, Akinyemi I and Mungall, Karen L and Hegde, Apurva and Diao, Lixia and Ma, Wencai and Sumazin, Pavel and Chen, Ting-Wen and Zuna, Rosemary and Al-Ahmadie, Hikmat and Zhou, Jane H and Drill, Esther and Wong, Christopher K and Stuart, Joshua M and Laird, Peter W and Hoadley, Katherine A and Weinstein, John N and Peto, Myron and Pickering, Curtis R and Chen, Zhong and Van Waes, Carter and Caesar-Johnson, Samantha J and Ferguson, Martin L and Tarnuzzer, Roy and Wang, Zhining and Zenklusen, Jean C and Chudamani, Sudha and Liu, Jia and Lolla, Laxmi and Naresh, Rashi and Pihl, Todd and Wan, Yunhu and Wu, Ye and Cho, Juok and DeFreitas, Timothy and Frazer, Scott and Gehlenborg, Nils and Getz, Gad and Kim, Jaegil and Lawrence, Michael S and Lin, Pei and Noble, Michael S and Saksena, Gordon and Voet, Doug and Chambwe, Nyasha and Dhankani, Varsha and Knijnenburg, Theo and Kramer, Roger and Leinonen, Kalle and Miller, Michael and Reynolds, Sheila and Hegde, Apurva M and Ju, Zhenlin and Korkut, Anil and Li, Jun and Liang, Han and Ling, Shiyun and Lu, Yiling and Mills, Gordon B and Ng, Kwok-Shing and Rao, Arvind and Abeshouse, Adam and Armenia, Joshua and Chakravarty, Debyani and de Bruijn, Ino and Gao, Jianjiong and Gross, Benjamin E and Heins, Zachary J and Kundra, Ritika and La, Konnor and Ladanyi, Marc and Luna, Augustin and Nissan, Moriah G and Ochoa, Angelica and Sanchez-Vega, Francisco and Sander, Chris and Schultz, Nikolaus and Sumer, S. Onur and Sun, Yichao and ... and The Cancer Genome Atlas Research Network and Canc Genome Atlas Res Network and Cancer Genome Atlas Research Network and Argonne National Lab. (ANL), Argonne, IL (United States). Advanced Photon Source (APS)
Cell reports (Cambridge), ISSN 2211-1247, 2018, Volume 23, Issue 1, pp. 194 - 212.e6
Journal Article
Molecular biology and evolution, ISSN 1537-1719, 2018, Volume 35, Issue 3, pp. 543 - 548
Genomics promises comprehensive surveying of genomes and metagenomes, but rapidly changing technologies and expanding data volumes make evaluation of... 
Metagenomics | Evolution | Transcriptomics | Bioinformatics | PLANT | EVOLUTIONARY | ORTHOLOGS | BIOCHEMISTRY & MOLECULAR BIOLOGY | COMPLETENESS | evolution | BACTERIAL | ORTHODB | GENOME | EVOLUTIONARY BIOLOGY | metagenomics | FUNGAL | bioinformatics | GENETICS & HEREDITY | transcriptomics | IMPROVEMENTS | TOOL | Fast Track
Journal Article
F1000 research, ISSN 2046-1402, 2016, Volume 4, p. 1521
High-throughput sequencing of cDNA (RNA-seq) is used extensively to characterize the transcriptome of cells. Many transcriptomic studies aim at comparing... 
Structure: Transcription & Translation | Bioinformatics | Genomics
Journal Article
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 0027-8424, 07/2018, Volume 115, Issue 28, pp. E6437 - E6446
Journal Article
Proceedings of the National Academy of Sciences - PNAS, ISSN 1091-6490, 2013, Volume 110, Issue 27, pp. 11151 - 11156
Bifidobacteria represent one of the dominant groups of microorganisms colonizing the human infant intestine. Commensal bacteria that interact with a eukaryotic... 
Bifidobacterium | HT29 cells | Commensals | Epithelial cells | Genes | Cell lines | Bacteria | Mice | Bacterial adhesion | Caco 2 cells | Probiotics | Host-microbe interaction | Transcriptomics | Genomics | MULTIDISCIPLINARY SCIENCES | ESCHERICHIA-COLI | COLONIZATION | host-microbe interaction | ADHERENCE | GRAM-POSITIVE BACTERIA | transcriptomics | genomics | STAPHYLOCOCCUS-AUREUS | GENOME ANALYSIS | LONG POLAR FIMBRIAE | BINDING | EXPRESSION | BREVE UCC2003 | probiotics | Bifidobacterium - immunology | Humans | Aminoacyltransferases - genetics | Infant | Transcriptome - immunology | Fimbriae, Bacterial - genetics | Cysteine Endopeptidases - metabolism | Intestinal Mucosa - immunology | Female | Fimbriae, Bacterial - immunology | Bifidobacterium - physiology | Lactococcus lactis - genetics | Cell Line | Genes, Bacterial | Lactococcus lactis - physiology | Bacterial Adhesion - immunology | Bifidobacterium - genetics | Bacterial Proteins - genetics | Intestinal Mucosa - microbiology | Bacterial Proteins - physiology | Animals | Fimbriae, Bacterial - physiology | Cysteine Endopeptidases - genetics | Bacterial Adhesion - genetics | Aminoacyltransferases - metabolism | Mice, Inbred BALB C | Cytokines - biosynthesis | Physiological aspects | Host-parasite relationships | Research | Health aspects | host–microbe interaction | Biological Sciences
Journal Article