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Molecular Biology and Evolution, ISSN 0737-4038, 06/2016, Volume 33, Issue 6, pp. 1635 - 1638
The Environment for Tree Exploration (ETE) is a computational framework that simplifies the reconstruction, analysis, and visualization of phylogenetic trees... 
Hypothesis testing | Tree comparison | Phylogenetics | NCBI taxonomy | tree visualization | Phylogenomics | Sequence Alignment - methods | Computational Biology - methods | Genomics | Databases, Genetic | Models, Genetic | Software | Internet | Phylogeny | Evolution, Molecular | Taxonomy | Index Medicus | Tree visualization | tree comparison | hypothesis testing | Resource | phylogenetics | phylogenomics
Journal Article
Information Visualization, ISSN 1473-8716, 10/2011, Volume 10, Issue 4, pp. 289 - 309
Data analysis often involves the comparison of complex objects. With the ever increasing amounts and complexity of data, the demand for systems to help with... 
Comparison | Taxonomy | Survey | BROWSER | REPRESENTATIONS | TIME | taxonomy | CHANGE BLINDNESS | GRAPHICS | COMPUTER SCIENCE, SOFTWARE ENGINEERING | TREES | HIERARCHICAL DATA | GENOMES | EXPLORATION | survey | SOCIAL NETWORKS | Studies | Visualization | Information | Analysis
Journal Article
Journal of the Association for Information Science and Technology, ISSN 2330-1635, 02/2017, Volume 68, Issue 2, pp. 392 - 411
Journal Article
Molecular Ecology Resources, ISSN 1755-098X, 01/2011, Volume 11, Issue 1, pp. 151 - 153
Haplotype networks are commonly used for representing associations between sequences, yet there is currently no straightforward way to create optimal layouts.... 
layout | drawing | minimum spanning | visualization | haplotype | network | Drawing | Visualization | Layout | Haplotype | Minimum spanning | Network | GENE GENEALOGIES | EVOLUTIONARY BIOLOGY | TREES | BIOCHEMISTRY & MOLECULAR BIOLOGY | ECOLOGY | Haplotypes | Genetics, Population - instrumentation | User-Computer Interface | Computer Graphics - instrumentation | Software | Humans | Algorithms | Teachers | Automation | Index Medicus
Journal Article
IEEE Transactions on Visualization and Computer Graphics, ISSN 1077-2626, 09/2006, Volume 12, Issue 5, pp. 741 - 748
Journal Article
IEEE Transactions on Visualization and Computer Graphics, ISSN 1077-2626, 01/2018, Volume 24, Issue 1, pp. 719 - 728
We present a novel type of circular treemap, where we intentionally allocate extra space for additional visual variables. With this extended visual design... 
Visualization | Uncertainty | tree layout | Computational modeling | Indexes | circle packing | contours | Standards | hierarchy visualization | Layout | Data visualization | Uncertainty visualization | treemaps | COMPUTER SCIENCE, SOFTWARE ENGINEERING | LAYOUT | EULER DIAGRAMS | ENCODINGS | Bubbles | Statistical models | Hierarchies | Computer simulation | Shading | Standard error
Journal Article
IEEE Transactions on Visualization and Computer Graphics, ISSN 1077-2626, 01/2000, Volume 6, Issue 1, pp. 24 - 43
This is a survey on graph visualization and navigation techniques, as used in information visualization. Graphs appear in numerous applications such as Web... 
Navigation | Tree graphs | Taxonomy | Data visualization | Project management | Data structures | Application software | Computer Society | Books | Usability | COMPUTER SCIENCE, SOFTWARE ENGINEERING | navigation | DRAWING GRAPHS | TREES | graph visualization | ALGORITHM | focus plus context | graph drawing | clustering | information visualization | fish-eye | Drawing | Visualization | Browsing | Computer graphics | Graphs
Journal Article
Journal of the American Statistical Association, ISSN 0162-1459, 10/2017, Volume 112, Issue 520, pp. 1684 - 1696
We study the plug-in estimator for density level sets under Hausdorff loss. We derive asymptotic theory for this estimator, and based on this theory, we... 
Visualization | Level set clustering | Asymptotic theory | Anomaly detection | Nonparametric inference | SCALE-SPACE | UNIFORM | STATISTICS & PROBABILITY | MEAN SHIFT | CONSISTENCY | NONPARAMETRIC-ESTIMATION | CLUSTER TREE | CONFIDENCE
Journal Article
Methods in Ecology and Evolution, ISSN 2041-210X, 01/2017, Volume 8, Issue 1, pp. 28 - 36
We present an r package, ggtree , which provides programmable visualization and annotation of phylogenetic trees. ggtree can read more tree file formats than... 
annotation | phylogeny | visualization | package | evolution | bioconductor | r package | MAXIMUM-LIKELIHOOD | CHINA | ESTABLISHMENT | SOFTWARE | PLACEMENT | SEQUENCE | BIOLOGY | ECOLOGY | DIVERGENCE | TOOL | Trees | Phylogenetics
Journal Article
IEEE Transactions on Visualization and Computer Graphics, ISSN 1077-2626, 05/2014, Volume 20, Issue 5, pp. 702 - 713
We present a chess visualization to convey the changes in a game over successive generations. It contains a score chart, an evolution graph and a chess board,... 
Visualization | Chess visualization | Data visualization | Games | Licenses | Market research | Decision trees | Artificial intelligence | graph | COMPUTER SCIENCE, SOFTWARE ENGINEERING | NULL-MOVE | TREES | PROGRAMS | SEARCH | EXPLORATION | GRAPHS | Chess | Strategy | Graphs | Evolution | Players
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